STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0573annotation not available (632 aa)    
Predicted Functional Partners:
XCC0502
annotation not available
  
     0.689
XCC1995
annotation not available
  
     0.682
CAP49937.1
annotation not available
  
     0.675
xadA
Outer membrane protein; Autotransporter adhesin
 
   
 0.675
XCC3871
Mn2+-dependent serine/threonine protein kinase
 
   
 0.666
XCC1496
annotation not available
  
     0.660
nlpD
Lipoprotein; Membrane proteins related to metalloendopeptidases
  
  
 0.659
CAP49378.1
Antirepressor regulating drug resistance,predicted signal transduction N-terminal membrane component
  
     0.657
CAP52025.1
Integrase
  
   
 0.652
XCC3075
annotation not available
 
     0.651
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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