STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0571Uncharacterized protein (171 aa)    
Predicted Functional Partners:
XCC4179
annotation not available
  
     0.749
XCC0588
annotation not available
  
     0.626
XCC4011
annotation not available
  
     0.540
XCC4130
annotation not available
  
     0.535
XCC4155
Unnamed protein product
  
     0.525
XCC1861
annotation not available
  
     0.519
XCC0692
Histone acetyltransferase HPA2 and related acetyltransferases
  
     0.503
XCC4146
annotation not available
  
     0.498
CAP50942.1
annotation not available
  
     0.487
XCC0671
annotation not available
  
     0.480
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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