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ybjY protein (Xanthomonas campestris campestris) - STRING interaction network
"ybjY" - ABC transporter permease in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybjYABC transporter permease; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (423 aa)    
Predicted Functional Partners:
XCC0566
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, permease component (430 aa)
 
 
  0.967
XCC0565
ABC transporter permease; ABC-type antimicrobial peptide transport system, permease component (402 aa)
 
 
  0.948
ycfV
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, ATPase component (239 aa)
 
 
  0.939
XCC0562
Histidine kinase/response regulator hybrid protein-like protein; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation (450 aa)
 
          0.879
XCC0563
Histidine kinase/response regulator hybrid protein; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains (472 aa)
 
          0.687
XCC0016
annotation not available (237 aa)
   
          0.617
mdtC
Transport protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1028 aa)
 
 
  0.608
mdtB
Transport protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1166 aa)
 
 
  0.601
czcA
Putative cation efflux system, RND-component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1075 aa)
   
 
  0.565
acrE
Acriflavin resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (450 aa)
   
     
  0.565
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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