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XCC0565 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0565" - ABC transporter permease in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0565ABC transporter permease; ABC-type antimicrobial peptide transport system, permease component (402 aa)    
Predicted Functional Partners:
ycfV
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, ATPase component (239 aa)
 
  0.976
ybjY
ABC transporter permease; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (423 aa)
 
 
  0.948
XCC0562
Histidine kinase/response regulator hybrid protein-like protein; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation (450 aa)
 
          0.892
XCC0566
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, permease component (430 aa)
       
0.847
tptC
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, ATPase component (229 aa)
 
  0.758
XCC0563
Histidine kinase/response regulator hybrid protein; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains (472 aa)
 
          0.721
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner (227 aa)
 
 
  0.667
czcC
Cation efflux system protein; Outer membrane protein (421 aa)
 
 
  0.579
acrE
Acriflavin resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (450 aa)
 
 
  0.571
XCC3914
Uncharacterized protein; ABC-type antimicrobial peptide transport system, permease component (439 aa)
   
     
  0.563
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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