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XCC0545 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0545" - Xaa-Pro dipeptidase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0545Xaa-Pro dipeptidase; Imidazolonepropionase and related amidohydrolases (425 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate (560 aa)
   
   
  0.528
XCC3921
Peptidase; Predicted aminopeptidases (602 aa)
   
        0.498
folH
Predicted aminopeptidases (549 aa)
   
        0.494
XCC0024
Uncharacterized protein; Predicted aminopeptidases (594 aa)
   
        0.488
ampC1
Beta-lactamase class C and other penicillin binding proteins (459 aa)
   
          0.482
XCC3157
Predicted aminopeptidases (375 aa)
   
        0.478
XCC3158
Predicted aminopeptidases (92 aa)
   
        0.444
XCC3032
annotation not available (215 aa)
   
          0.434
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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