STRINGSTRING
XCC0541 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0541" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0541annotation not available (252 aa)    
Predicted Functional Partners:
XCC0114
Transcriptional regulator; FOG- WD40 repeat (1172 aa)
   
          0.760
XCC0572
annotation not available (384 aa)
   
          0.747
XCC2602
annotation not available (393 aa)
   
          0.737
XCC1430
annotation not available (874 aa)
   
          0.672
XCC0372
Hydrolase; Lysophospholipase (308 aa)
   
          0.656
XCC3443
Methyltransferase; DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family (354 aa)
   
          0.627
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
   
          0.614
XCC0016
annotation not available (237 aa)
   
          0.602
XCC4062
annotation not available (318 aa)
   
          0.595
XCC3444
annotation not available (381 aa)
   
          0.563
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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