STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3635Outer membrane receptor proteins mostly Fe transport (950 aa)    
Predicted Functional Partners:
XCC3634
annotation not available
       0.845
XCC2825
annotation not available
 
    0.644
XCC3636
Oxidoreductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  
    0.635
XCC4133
annotation not available
 
     0.633
XCC1179
Outer membrane receptor proteins mostly Fe transport
  
    0.625
XCC3966
annotation not available
 
     0.620
fhuA1
Outer membrane receptor proteins, mostly Fe transport
 
  
 0.610
suxA
Outer membrane receptor proteins, mostly Fe transport
 
  
 0.597
XCC3405
Outer membrane receptor proteins mostly Fe transport
 
  
 0.594
XCC3964
annotation not available
  
     0.566
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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