STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3643Signal transduction histidine kinase (702 aa)    
Predicted Functional Partners:
XCC3523
Histidine kinase/response regulator hybrid protein; FOG: PAS/PAC domain
 
 
 0.902
XCC2360
Signal transduction histidine kinase
 
 
0.866
XCC0483
Two-component system sensor protein; Signal transduction histidine kinase
 
 
0.865
rpfC
Sensory/regulatory protein RpfC; Member of the two-component regulatory system RpfG/RpfC, which is required for full virulence and for formation and dispersal of biofilms. Involved in sensing and responding to the diffusible signaling factor (DSF), which is essential for cell- cell signaling. RpfC is probably a sensor of environmental signals, including DSF, which is autophosphorylated at a histidine residue in response to the signal. Then, probably activates RpfG via a four-step phosphorelay. May also negatively regulate the production of DSF, independently of RpfG (By similarity)
 
 
0.856
pilL
Chemotaxis protein histidine kinase and related kinases
 
 
0.844
cheA2
Chemotaxis protein histidine kinase and related kinases
  
 
 0.843
cheA3
Chemotaxis protein histidine kinase and related kinases
  
 
 0.843
XCC2153
Two-component system sensor protein; FOG: PAS/PAC domain
 
 
0.836
XCC1185
annotation not available
 
 
0.830
XCC3686
Methyltransferase; Unnamed protein product
  
 0.830
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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