STRINGSTRING
wrbA protein (Xanthomonas campestris campestris) - STRING interaction network
"wrbA" - Tryptophan repressor binding protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wrbATryptophan repressor binding protein; Multimeric flavodoxin WrbA (191 aa)    
Predicted Functional Partners:
XCC0742
NADPH-quinone reductase and related Zn-dependent oxidoreductases (325 aa)
     
   
  0.756
XCC3667
Transcriptional regulator (311 aa)
              0.695
XCC0270
Putative NADP-dependent oxidoreductases (342 aa)
     
        0.641
CAP52479.1
Site-specific recombinase XerD (464 aa)
           
  0.581
XCC1459
Integrase (510 aa)
           
  0.581
CAP52025.1
Integrase (489 aa)
           
  0.581
CAP52012.1
Integrase (466 aa)
           
  0.581
CAP51977.1
Integrase (396 aa)
           
  0.581
intS
Integrase; Belongs to the ’phage’ integrase family (645 aa)
           
  0.581
XCC1613
Integrase; Belongs to the ’phage’ integrase family (482 aa)
           
  0.581
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (16%) [HD]