STRINGSTRING
XCC3677 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3677" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3677annotation not available (436 aa)    
Predicted Functional Partners:
XCC3676
Transcriptional regulator protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (258 aa)
   
  0.975
CAP51721.1
Response regulator of the LytR/AlgR family (233 aa)
 
   
  0.760
XCC3512
Two-component system regulatory protein; Response regulator of the LytR/AlgR family (248 aa)
   
  0.712
XCC3675
annotation not available (115 aa)
              0.640
CAP51722.1
Response regulator of the LytR/AlgR family (530 aa)
   
          0.540
XCC3678
annotation not available (405 aa)
              0.535
rpfD
Regulatory protein; Response regulator of the LytR/AlgR family (305 aa)
 
   
  0.488
XCC2360
Signal transduction histidine kinase (1364 aa)
   
   
  0.479
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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