STRINGSTRING
XCC3678 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3678" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3678annotation not available (405 aa)    
Predicted Functional Partners:
XCC3244
Ketoglutarate semialdehyde dehydrogenase; NAD-dependent aldehyde dehydrogenases (526 aa)
   
   
  0.730
aldH
Ketoglutarate semialdehyde dehydrogenase; NAD-dependent aldehyde dehydrogenases (531 aa)
   
   
  0.716
tdcF
TdcF protein; Putative translation initiation inhibitor yjgF family (167 aa)
 
          0.661
XCC2415
4-hydroxyproline 2-epimerase; Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is likely involved in a degradation pathway that converts t4LHyp to alpha- ketoglutarate. Can also catalyze the epimerization of trans-3- hydroxy-L-proline (t3LHyp) to cis-3-hydroxy-D-proline (c3DHyp), albeit with 500-fold lower efficiency. Displays no proline racemase activity (312 aa)
         
  0.615
uriC
Uncharacterized protein conserved in bacteria (163 aa)
           
  0.604
XCC1668
annotation not available (448 aa)
   
     
  0.560
lao
Flavin monoamine oxidase-related protein; Monoamine oxidase (402 aa)
 
     
  0.551
XCC1390
annotation not available (349 aa)
   
          0.550
fadH
NADH-flavin oxidoreductases Old Yellow Enzyme family (679 aa)
     
 
  0.543
XCC3677
annotation not available (436 aa)
              0.535
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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