STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3697Unnamed protein product (394 aa)    
Predicted Functional Partners:
glf
UDP-galactopyranose mutase
  
 0.997
XCC3699
Uncharacterized protein; Beta-glucosidase/6-phospho-beta- glucosidase/beta -galactosidase
   
 0.992
galE
UDP-glucose 4-epimerase
 
  
 0.826
msbA5
ATP binding transporter 1; ABC-type bacteriocin/lantibiotic exporters,contain an N-terminal double-glycine peptidase domain
 
 
 0.805
XCC2018
annotation not available
  
    0.587
XCC1996
Glutathione-dependent formaldehyde dehydrogenase; Threonine dehydrogenase and related Zn-dependent dehydrogenases
 
    0.437
XCC3694
Uncharacterized protein
 
     0.430
glgB1
1,4-alpha-glucan branching enzyme GlgB 1; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily
   
 
 0.427
glgB2
1,4-alpha-glucan branching enzyme GlgB 2; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily
   
 
 0.427
glgZ
Malto-oligosyltrehalose trehalohydrolase; 1,4-alpha-glucan branching enzyme
   
 
 0.427
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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