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glf protein (Xanthomonas campestris campestris) - STRING interaction network
"glf" - UDP-galactopyranose mutase in Xanthomonas campestris campestris
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glfUDP-galactopyranose mutase (398 aa)    
Predicted Functional Partners:
XCC3697
Unnamed protein product (394 aa)
   
  0.997
galE
UDP-glucose 4-epimerase (410 aa)
 
 
  0.990
XCC3699
Uncharacterized protein; Beta-glucosidase/6-phospho-beta- glucosidase/beta -galactosidase (383 aa)
          0.931
rmlC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (185 aa)
   
   
  0.741
msbA5
ATP binding transporter 1; ABC-type bacteriocin/lantibiotic exporters,contain an N-terminal double-glycine peptidase domain (593 aa)
 
          0.721
aphB
Phytochrome-like protein; Bacteriophytochrome (light-regulated signal transduction histidine kinase) (634 aa)
           
  0.701
XCC1670
Uncharacterized protein; Isomerization of a sugar nucleotide precursor of an unidentified cell surface carbohydrate (140 aa)
   
   
  0.666
XCC2013
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (193 aa)
   
   
  0.666
rbfC
O-antigen biosynthesis protein; Glycosyltransferases involved in cell wall biogenesis (1208 aa)
   
   
  0.540
rmlB
dTDP-glucose 4,6-dehydratase; Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily (351 aa)
   
 
  0.529
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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