STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3712Flagellar motor protein (215 aa)    
Predicted Functional Partners:
XCC3713
annotation not available
     0.993
XCC3711
annotation not available
     0.991
XCC3710
annotation not available
 
     0.974
pilL
Chemotaxis protein histidine kinase and related kinases
  
  
 0.897
cheA2
Chemotaxis protein histidine kinase and related kinases
  
  
 0.782
cheA3
Chemotaxis protein histidine kinase and related kinases
  
  
 0.782
XCC3686
Methyltransferase; Unnamed protein product
  
  
 0.775
flgJ
Unnamed protein product
  
  
 0.593
XCC1891
MotA protein; Flagellar motor component
  
  
 0.547
XCC3653
Chemotaxis protein; Flagellar motor component
  
  
 0.547
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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