STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3714Ferrichrome-iron receptor 3; Outer membrane receptor proteins mostly Fe transport (712 aa)    
Predicted Functional Partners:
XCC3715
annotation not available
 
     0.847
XCC3716
annotation not available
 
     0.830
drrA
ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase component
 
     0.799
XCC1593
Periplasmic protein TonB, links inner and outer membranes
 
 
 0.631
tonB1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity)
 
 
 0.628
XCC3967
Periplasmic protein TonB, links inner and outer membranes
 
 
 0.622
XCC3067
Outer membrane cobalamin receptor protein
  
 
 0.621
tonB
Periplasmic protein TonB, links inner and outer membranes
  
 
 0.553
XCC2927
Periplasmic protein TonB links inner and outer membranes
  
 
 0.546
XCC2078
annotation not available
  
 
 0.546
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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