STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3715annotation not available (422 aa)    
Predicted Functional Partners:
drrA
ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase component
 
  
 0.978
XCC3716
annotation not available
 
   
 0.977
XCC3714
Ferrichrome-iron receptor 3; Outer membrane receptor proteins mostly Fe transport
 
     0.847
yapH
annotation not available
  
     0.689
XCC2025
Subtilisin-like serine proteases
  
     0.623
XCC3718
Uncharacterized protein; Predicted carboxypeptidase
 
     0.549
oprN3
Outer membrane component of multidrug efflux pump; Outer membrane protein
  
   
 0.525
XCC1350
annotation not available
  
     0.483
XCC0372
Hydrolase; Lysophospholipase
  
     0.465
XCC0738
annotation not available
  
     0.423
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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