STRINGSTRING
XCC3742 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3742" - Predicted membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3742Predicted membrane protein (500 aa)    
Predicted Functional Partners:
XCC3741
annotation not available (192 aa)
 
   
  0.973
ribA
GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5’-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family (377 aa)
              0.792
XCC1427
annotation not available (71 aa)
   
          0.725
XCC0557
annotation not available (127 aa)
   
        0.679
XCC1558
Uncharacterized protein (111 aa)
   
          0.615
XCC0858
annotation not available (114 aa)
   
          0.592
XCC1130
Uncharacterized small membrane protein (134 aa)
   
          0.572
XCC3758
annotation not available (214 aa)
   
          0.567
XCC4130
annotation not available (324 aa)
   
          0.562
XCC3757
annotation not available (246 aa)
   
          0.549
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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