STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3753Tfp pilus assembly protein major pilin PilA (246 aa)    
Predicted Functional Partners:
pilA
Fimbrial protein precursor; Tfp pilus assembly protein, major pilin PilA
  
  
0.816
smg
Protein Smg homolog; Uncharacterized protein conserved in bacteria; Belongs to the Smg family
       0.807
XCC3754
Predicted membrane protein/domain
 
    
0.793
smf
DNA processing chain A; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
     
 0.754
XCC3750
Uncharacterized protein containing LysM domain
 
   
 0.705
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins
  
   
 0.662
XCC0572
annotation not available
  
     0.660
XCC3077
annotation not available
  
     0.586
XCC3148
Lipase/esterase; Phospholipase/lecithinase/hemolysin
      
 0.583
XCC3189
Uncharacterized protein
  
    0.553
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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