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XCC3754 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3754" - Predicted membrane protein/domain in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3754Predicted membrane protein/domain (381 aa)    
Predicted Functional Partners:
XCC3753
Tfp pilus assembly protein major pilin PilA (246 aa)
 
       
0.793
smg
Protein Smg homolog; Uncharacterized protein conserved in bacteria; Belongs to the Smg family (157 aa)
              0.636
XCC1583
annotation not available (332 aa)
   
          0.623
XCC0531
Outer membrane receptor proteins mostly Fe transport (961 aa)
   
          0.567
XCC2790
annotation not available (152 aa)
   
          0.562
XCC3758
annotation not available (214 aa)
 
          0.545
smf
DNA processing chain A; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake (378 aa)
              0.534
XCC0546
annotation not available (270 aa)
   
          0.527
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (831 aa)
              0.503
XCC1401
annotation not available (300 aa)
   
          0.490
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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