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icd2 protein (Xanthomonas campestris campestris) - STRING interaction network
"icd2" - Monomeric isocitrate dehydrogenase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icd2Monomeric isocitrate dehydrogenase (743 aa)    
Predicted Functional Partners:
icd1
Isocitrate/isopropylmalate dehydrogenase (335 aa)
         
  0.970
acnB
Aconitate hydratase B; Aconitase B; Belongs to the aconitase/IPM isomerase family (863 aa)
 
 
  0.933
rpfA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (922 aa)
     
  0.925
sucA
2-oxoglutarate dehydrogenase complex,dehydrogenase (E1) component, and related enzymes (990 aa)
     
 
  0.916
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (455 aa)
     
    0.871
CAP53331.1
annotation not available (107 aa)
              0.845
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
   
 
  0.839
XCC3364
Aminotransferase; Aspartate/tyrosine/aromatic aminotransferase (423 aa)
   
 
    0.830
gltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases (493 aa)
     
 
  0.807
argH
Argininosuccinate lyase; Unnamed protein product (431 aa)
     
 
  0.803
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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