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mtrC protein (Xanthomonas campestris campestris) - STRING interaction network
"mtrC" - Membrane-fusion protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtrCMembrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (412 aa)    
Predicted Functional Partners:
XCC3788
Acriflavin resistance protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1101 aa)
 
  0.980
XCC3789
Acriflavin resistance protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1046 aa)
 
  0.940
XCC2368
Cation/multidrug efflux pump (1056 aa)
 
  0.835
mexB
Cation/multidrug efflux pump (1044 aa)
 
  0.784
mexF
Cation/multidrug efflux pump (1075 aa)
 
  0.782
raxC
Outer membrane protein (457 aa)
 
 
  0.720
oprN5
Outer membrane protein (504 aa)
 
 
  0.717
oprN4
Outer membrane protein (474 aa)
 
 
  0.672
czcA
Putative cation efflux system, RND-component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1075 aa)
 
  0.647
XCC2341
Outer membrane protein (492 aa)
 
 
  0.620
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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