STRINGSTRING
CAP53341.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP53341.1" - Uncharacterized protein conserved in bacteria in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP53341.1Uncharacterized protein conserved in bacteria (144 aa)    
Predicted Functional Partners:
XCC3790
Uncharacterized protein conserved in bacteria (139 aa)
        0.988
XCC3792
Uncharacterized protein; Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family. ECF subfamily (425 aa)
 
          0.762
XCC3791
annotation not available (118 aa)
              0.727
XCC3662
Uncharacterized protein conserved in bacteria (150 aa)
 
        0.475
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (30%) [HD]