STRINGSTRING
XCC3806 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3806" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3806annotation not available (469 aa)    
Predicted Functional Partners:
XCC3807
Chloromuconate cycloisomerase; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family (364 aa)
 
     
  0.938
ampD
N-acetylmuramoyl-L-alanine amidase; Negative regulator of beta-lactamase expression (266 aa)
 
     
  0.896
XCC3808
Uncharacterized protein conserved in bacteria (258 aa)
 
     
  0.803
nlpC
Lipoprotein; Cell wall-associated hydrolases (invasion-associated proteins) (191 aa)
           
  0.720
XCC3270
Oar protein; Outer membrane receptor proteins, mostly Fe transport (454 aa)
 
          0.570
XCC3271
Oar protein; Outer membrane receptor proteins, mostly Fe transport (605 aa)
 
          0.544
XCC2573
Oar protein; Outer membrane receptor for ferrienterochelin and colicins (1015 aa)
 
          0.528
XCC3809
Amino acid transporters (433 aa)
              0.497
pldA
Phospholipase; Outer membrane phospholipase A (376 aa)
   
          0.482
XCC3810
annotation not available (157 aa)
 
          0.463
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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