STRINGSTRING
XCC3810 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3810" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3810annotation not available (157 aa)    
Predicted Functional Partners:
XCC3809
Amino acid transporters (433 aa)
              0.733
XCC3808
Uncharacterized protein conserved in bacteria (258 aa)
 
          0.662
XCC2630
annotation not available (107 aa)
   
          0.513
XCC4011
annotation not available (248 aa)
   
          0.483
XCC0845
annotation not available (162 aa)
   
          0.480
XCC3807
Chloromuconate cycloisomerase; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family (364 aa)
 
          0.467
XCC3806
annotation not available (469 aa)
 
          0.463
XCC0823
annotation not available (76 aa)
   
          0.454
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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