STRINGSTRING
XCC3848 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3848" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3848annotation not available (220 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (219 aa)
              0.839
XCC2267
annotation not available (229 aa)
   
          0.776
XCC2250
annotation not available (196 aa)
   
          0.774
XCC0193
annotation not available (300 aa)
   
          0.774
XCC1742
annotation not available (172 aa)
   
          0.771
XCC0013
Uncharacterized protein (89 aa)
   
          0.771
XCC1129
annotation not available (393 aa)
   
          0.768
XCC2192
annotation not available (101 aa)
   
          0.768
cheB1
Protein-glutamate methylesterase; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain (393 aa)
   
          0.768
XCC3794
annotation not available (223 aa)
   
          0.766
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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