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dpm1 protein (Xanthomonas campestris campestris) - STRING interaction network
"dpm1" - Dolichol-phosphate mannosyltransferase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpm1Dolichol-phosphate mannosyltransferase; Glycosyltransferases involved in cell wall biogenesis (240 aa)    
Predicted Functional Partners:
XCC3855
Predicted membrane protein (113 aa)
 
          0.928
gla
Nucleotide sugar epimerase; UDP-glucose 4-epimerase (321 aa)
 
 
  0.884
XCC3746
Uncharacterized protein; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family (573 aa)
   
  0.800
XCC1119
Uncharacterized protein; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family (634 aa)
   
  0.790
wxcL
Glycosyltransferases involved in cell wall biogenesis (323 aa)
   
          0.644
ugd
Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (448 aa)
 
 
  0.641
parB
Chromosome partitioning protein; Predicted transcriptional regulators; Belongs to the ParB family (309 aa)
              0.592
XCC3849
ATPases involved in chromosome partitioning (265 aa)
              0.584
XCC3856
Uncharacterized protein (183 aa)
              0.552
XCC3852
annotation not available (242 aa)
              0.509
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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