STRINGSTRING
XCC3855 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3855" - Predicted membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3855Predicted membrane protein (113 aa)    
Predicted Functional Partners:
dpm1
Dolichol-phosphate mannosyltransferase; Glycosyltransferases involved in cell wall biogenesis (240 aa)
 
          0.928
gla
Nucleotide sugar epimerase; UDP-glucose 4-epimerase (321 aa)
              0.692
XCC2390
annotation not available (161 aa)
   
          0.616
XCC0211
annotation not available (106 aa)
   
          0.600
XCC3848
annotation not available (220 aa)
 
          0.584
XCC3856
Uncharacterized protein (183 aa)
              0.555
XCC0193
annotation not available (300 aa)
   
          0.544
XCC1009
Uncharacterized protein; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family (618 aa)
 
          0.543
XCC2656
annotation not available (60 aa)
   
          0.533
XCC2504
Uncharacterized protein (89 aa)
   
          0.529
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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