STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
entFATP-dependent serine activating enzyme; Non-ribosomal peptide synthetase modules and related proteins (1326 aa)    
Predicted Functional Partners:
ugt
Glucosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase
 
  
 0.923
hetI
HetI protein; Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily
 
 
 
 0.670
hemL
Glutamate-1-semialdehyde aminotransferase
    
 0.654
iucA
Iron transporter; Siderophore synthetase component
  
  
 0.637
CAP53420.1
annotation not available
       0.622
XCC2912
Cytochrome P450 hydroxylase; Unnamed protein product; Belongs to the cytochrome P450 family
 
 
 0.609
XCC1323
Putative membrane protein
      
 0.605
fabD
(acyl-carrier-protein) S-malonyltransferase
 
 
 0.598
bioI
annotation not available
  
 
 0.558
cypC
Fatty acid alpha hydroxylase; Cytochrome P450
  
 
 0.558
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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