STRINGSTRING
XCC3873 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3873" - Uncharacterized protein conserved in bacteria in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3873Uncharacterized protein conserved in bacteria (90 aa)    
Predicted Functional Partners:
comM
Competence related protein; Predicted ATPase with chaperone activity (506 aa)
              0.866
glnB2
Nitrogen regulatory protein PII; Belongs to the P(II) protein family (112 aa)
   
        0.708
XCC3260
UPF0149 protein XCC3260; Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family (227 aa)
   
          0.658
XCC1468
UPF0125 protein XCC1468; Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family (98 aa)
   
          0.479
mreD
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins (161 aa)
   
          0.473
smg
Protein Smg homolog; Uncharacterized protein conserved in bacteria; Belongs to the Smg family (157 aa)
   
          0.469
XCC3341
Uncharacterized protein conserved in bacteria (155 aa)
   
          0.464
XCC3997
YcgL domain-containing protein XCC3997; Uncharacterized protein conserved in bacteria (86 aa)
   
          0.456
XCC3875
Outer membrane lipoprotein Blc; Bacterial lipocalin (185 aa)
              0.448
gcvR
Glycine cleavage system transcriptional repressor; Unnamed protein product (208 aa)
   
          0.406
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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