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XCC3878 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3878" - Unnamed protein product in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3878Unnamed protein product (373 aa)    
Predicted Functional Partners:
XCC3879
Oxidoreductase; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 (358 aa)
   
  0.993
XCC3880
Transcriptional regulator (215 aa)
 
   
  0.954
pldA
Phospholipase; Outer membrane phospholipase A (376 aa)
         
    0.900
XCC1083
annotation not available (257 aa)
   
     
  0.500
XCC0162
Fatty-acid desaturase (409 aa)
     
   
  0.463
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1066 aa)
   
   
  0.417
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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