STRINGSTRING
XCC3880 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3880" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3880Transcriptional regulator (215 aa)    
Predicted Functional Partners:
XCC3878
Unnamed protein product (373 aa)
 
   
  0.954
XCC3879
Oxidoreductase; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 (358 aa)
 
          0.917
plsB
Glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family (889 aa)
   
   
  0.682
desC
Inserts a double bond at the delta position of fatty acids (333 aa)
 
     
  0.563
fabA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16-0, being most active on intermediate chain length (171 aa)
           
  0.520
XCC0162
Fatty-acid desaturase (409 aa)
         
  0.475
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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