STRINGSTRING
XCC3886 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3886" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3886annotation not available (379 aa)    
Predicted Functional Partners:
XCC3885
Hydrolase or peptidase; Esterase/lipase (289 aa)
 
        0.980
CAP53443.1
annotation not available (54 aa)
              0.671
XCC2722
Outer membrane phospholipase A (398 aa)
   
          0.554
XCC3075
annotation not available (388 aa)
   
          0.545
XCC2777
annotation not available (267 aa)
   
          0.511
malT
ATP-dependent transcriptional regulator (921 aa)
   
          0.481
XCC1994
annotation not available (192 aa)
   
        0.474
XCC0123
Uncharacterized protein (1283 aa)
   
          0.473
XCC0075
annotation not available (103 aa)
   
          0.460
XCC2775
Uncharacterized protein conserved in bacteria (214 aa)
   
          0.443
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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