STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sulACell division inhibitor; Predicted nucleoside-diphosphate sugar epimerase (296 aa)    
Predicted Functional Partners:
bcp
Peroxiredoxin Bcp; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events
  
    0.828
XCC0784
Glycine rich protein; Beta-propeller domains of methanol dehydrogenase type
   
    0.788
rpmI
Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family
   
    0.663
XCC2430
Outer membrane lipoprotein; Bacterial lipocalin
    0.573
XCC3875
Outer membrane lipoprotein Blc; Bacterial lipocalin
    0.547
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family
  
 
 0.492
pitA
Phosphate/sulphate permeases
   
    0.485
XCC3888
annotation not available
       0.480
XCC3889
Predicted outer membrane protein
       0.480
XCC1281
Uncharacterized protein; Predicted NAD/FAD-dependent oxidoreductase
 
    0.445
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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