STRINGSTRING
ygiY protein (Xanthomonas campestris campestris) - STRING interaction network
"ygiY" - Two-component system sensor protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygiYTwo-component system sensor protein; Signal transduction histidine kinase (399 aa)    
Predicted Functional Partners:
ygiX
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (221 aa)
 
 
  0.989
tctD
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (290 aa)
 
 
  0.783
lpd3
Pyridine nucleotide-disulfide oxidoreductase; Pyruvate/2-oxoglutarate dehydrogenase complex,dihydrolipoamide dehydrogenase (E3) component, and related enzymes; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (460 aa)
     
      0.670
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase (762 aa)
   
 
  0.646
phoP
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (227 aa)
 
 
  0.637
XCC3892
Predicted membrane protein (242 aa)
              0.629
CAP50779.1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (248 aa)
 
 
      0.609
creB
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (256 aa)
 
 
  0.605
XCC0779
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (248 aa)
 
 
      0.588
XCC2924
PilH protein; FOG- CheY-like receiver (120 aa)
 
 
      0.578
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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