STRINGSTRING
XCC3906 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3906" - Cytochrome B561 in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3906Cytochrome B561 (180 aa)    
Predicted Functional Partners:
srpA
Catalase-related peroxidase; Has an organic peroxide-dependent peroxidase activity (363 aa)
 
          0.973
XCC2851
Uncharacterized protein; Belongs to the UPF0312 family (189 aa)
 
   
  0.654
XCC3983
Thioredoxin; Thiol-disulfide isomerase and thioredoxins (108 aa)
           
  0.487
yneN
Thioredoxin; Thiol-disulfide isomerase and thioredoxins (204 aa)
           
  0.487
XCC1180
Thioredoxin; Thiol-disulfide isomerase and thioredoxins (148 aa)
           
  0.487
XCC0082
Thioredoxin; Thiol-disulfide isomerase and thioredoxins (110 aa)
           
  0.487
ankB
Ankyrin-like protein; FOG- Ankyrin repeat (191 aa)
           
  0.453
pepA2
Leucyl aminopeptidase; Belongs to the peptidase M17 family (456 aa)
              0.442
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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