STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3913Uncharacterized protein; ABC-type antimicrobial peptide transport system, permease component (386 aa)    
Predicted Functional Partners:
tptC
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, ATPase component
 
 
 0.980
XCC3914
Uncharacterized protein; ABC-type antimicrobial peptide transport system, permease component
 
    
0.917
acrE
Acriflavin resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
 
 
 0.911
ycfV
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, ATPase component
 
 
 0.702
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner
  
 
 0.645
czcC
Cation efflux system protein; Outer membrane protein
 
 
 0.579
oprN6
Outer membrane protein
 
 
 0.579
oprN1
Outer membrane protein
  
 
 0.515
raxC
Outer membrane protein
  
 
 0.515
oprN2
Outer membrane protein
  
 
 0.515
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (6%) [HD]