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ankB protein (Xanthomonas campestris campestris) - STRING interaction network
"ankB" - Ankyrin-like protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankBAnkyrin-like protein; FOG- Ankyrin repeat (191 aa)    
Predicted Functional Partners:
cat3
Catalase; Belongs to the catalase family (507 aa)
 
 
  0.853
XCC4048
annotation not available (768 aa)
         
  0.611
vipA
Polysaccharide biosynthetic protein; UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (430 aa)
           
  0.604
CAP53506.1
annotation not available (119 aa)
              0.590
XCC0240
annotation not available (886 aa)
   
 
  0.549
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family (499 aa)
   
 
  0.517
XCC0795
Acetoin utilization family protein; Deacetylases including yeast histone deacetylase and acetoin utilization protein (302 aa)
       
 
  0.515
XCC0841
annotation not available (737 aa)
     
      0.504
XCC0842
annotation not available (784 aa)
     
      0.504
XCC3255
annotation not available (810 aa)
     
      0.504
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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