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XCC3954 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3954" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3954Uncharacterized protein; Periplasmic component of the Tol biopolymer transport system (293 aa)    
Predicted Functional Partners:
mopB
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (365 aa)
 
 
  0.877
XCC1436
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (241 aa)
 
 
  0.856
aroE
Shikimate dehydrogenase (NADP(+)); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (283 aa)
              0.734
XCC3952
annotation not available (117 aa)
              0.647
XCC0546
annotation not available (270 aa)
   
 
 
  0.647
XCC3484
annotation not available (239 aa)
 
 
 
  0.630
XCC3951
annotation not available (75 aa)
              0.613
XCC1583
annotation not available (332 aa)
   
          0.606
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
 
 
  0.582
XCC0758
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (431 aa)
 
 
  0.574
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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