STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3983Thioredoxin; Thiol-disulfide isomerase and thioredoxins (108 aa)    
Predicted Functional Partners:
XCC3984
annotation not available
 
     0.973
nrdB
Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family
 
     0.812
XCC1046
Peroxiredoxin
   
 
 0.746
dsbA1
Thiol:disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins
 
 
 0.677
XCC3900
annotation not available
  
     0.633
dsbC
Thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
  
 
 0.628
dsbA2
Thiol:disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins
  
 
 0.627
dsbD
C-type cytochrome biogenesis protein; Thiol:disulfide interchange protein
  
 
 0.621
ilvM
Acetolactate synthase (isozyme II) small (regulatory) subunit
  
     0.606
XCC2579
Reductase; Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzymes; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
 
 
 0.603
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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