STRINGSTRING
XCC3984 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3984" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3984annotation not available (161 aa)    
Predicted Functional Partners:
XCC3983
Thioredoxin; Thiol-disulfide isomerase and thioredoxins (108 aa)
 
          0.973
nrdB
Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family (347 aa)
 
     
  0.917
nrdA
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (827 aa)
 
     
  0.798
ilvM
Acetolactate synthase (isozyme II) small (regulatory) subunit (85 aa)
   
          0.699
XCC3900
annotation not available (167 aa)
   
          0.656
XCC4090
annotation not available (299 aa)
 
          0.639
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
   
  0.636
XCC3958
annotation not available (150 aa)
   
          0.627
XCC3901
annotation not available (159 aa)
   
          0.613
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
           
  0.605
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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