STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
fabF2Beta-ketoacyl-[ACP] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the beta-ketoacyl-ACP synthases family (398 aa)    
Predicted Functional Partners:
XCC4003
3-oxoacyl-[ACP] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
 0.992
fabD
(acyl-carrier-protein) S-malonyltransferase
 0.990
fabG2
3-oxoacyl-[ACP] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
 0.985
XCC3999
annotation not available
     0.983
fabH2
3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and/or straight-chain of fatty acids; Belongs to the FabH family
 
 
 0.967
mdcH
Malonyl CoA-ACP transacylase; Membrane protease subunits, stomatin/prohibitin homologs
 0.964
XCC4000
Dolichyl-phosphate mannose synthase related protein; Glycosyltransferases involved in cell wall biogenesis
 
     0.958
XCC0416
3-oxoacyl-[ACP] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
 0.953
fabV
Enoyl-[acyl-carrier-protein] reductase [NADH]; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family
  
 
 0.952
XCC0384
Oxidoreductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  
 0.947
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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