STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3999annotation not available (257 aa)    
Predicted Functional Partners:
fabF2
Beta-ketoacyl-[ACP] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the beta-ketoacyl-ACP synthases family
     0.983
XCC4000
Dolichyl-phosphate mannose synthase related protein; Glycosyltransferases involved in cell wall biogenesis
 
     0.961
XCC4001
Halogenase; Dehydrogenases (flavoproteins)
 
   
 0.960
acpP2
Acyl carrier protein
 
 
 0.938
XCC4009
Dehydratase; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
 
 
 0.928
XCC4003
3-oxoacyl-[ACP] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
 
 0.893
XCC4015
AMP-ligase; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
 
   
 0.863
XCC4007
annotation not available
 
   
 0.860
XCC4005
Membrane protein; Predicted exporter
 
     0.857
XCC4004
Phosphotransferase; Unnamed protein product
 
     0.856
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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