STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4000Dolichyl-phosphate mannose synthase related protein; Glycosyltransferases involved in cell wall biogenesis (273 aa)    
Predicted Functional Partners:
XCC4008
Predicted acyltransferase
     0.965
XCC3999
annotation not available
 
     0.961
fabF2
Beta-ketoacyl-[ACP] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the beta-ketoacyl-ACP synthases family
 
     0.958
XCC4001
Halogenase; Dehydrogenases (flavoproteins)
 
     0.907
acpP2
Acyl carrier protein
 
    0.786
XCC4005
Membrane protein; Predicted exporter
 
     0.774
XCC4015
AMP-ligase; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
 
 
   0.770
XCC4007
annotation not available
 
     0.682
XCC4003
3-oxoacyl-[ACP] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
 
   0.653
XCC4004
Phosphotransferase; Unnamed protein product
 
     0.636
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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