STRINGSTRING
XCC4001 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4001" - Halogenase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4001Halogenase; Dehydrogenases (flavoproteins) (533 aa)    
Predicted Functional Partners:
XCC3999
annotation not available (257 aa)
 
     
  0.960
fabF2
Beta-ketoacyl-[ACP] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the beta-ketoacyl-ACP synthases family (398 aa)
 
     
  0.938
XCC4000
Dolichyl-phosphate mannose synthase related protein; Glycosyltransferases involved in cell wall biogenesis (273 aa)
 
          0.907
XCC4015
AMP-ligase; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases (511 aa)
 
     
  0.876
XCC4008
Predicted acyltransferase (324 aa)
 
     
  0.873
XCC4005
Membrane protein; Predicted exporter (788 aa)
 
     
  0.872
rapK
annotation not available (335 aa)
 
     
  0.828
acpP2
Acyl carrier protein (109 aa)
 
   
  0.825
XCC4011
annotation not available (248 aa)
 
     
  0.805
XCC4007
annotation not available (215 aa)
 
     
  0.744
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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