STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4001Halogenase; Dehydrogenases (flavoproteins) (533 aa)    
Predicted Functional Partners:
XCC3999
annotation not available
 
   
 0.960
fabF2
Beta-ketoacyl-[ACP] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the beta-ketoacyl-ACP synthases family
 
   
 0.938
XCC4000
Dolichyl-phosphate mannose synthase related protein; Glycosyltransferases involved in cell wall biogenesis
 
     0.907
XCC4015
AMP-ligase; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
 
   
 0.876
XCC4008
Predicted acyltransferase
 
   
 0.873
XCC4005
Membrane protein; Predicted exporter
 
   
 0.872
rapK
annotation not available
 
   
 0.828
acpP2
Acyl carrier protein
 
  
 0.825
XCC4011
annotation not available
 
   
 0.805
XCC4007
annotation not available
 
   
 0.744
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (10%) [HD]