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rapK protein (Xanthomonas campestris campestris) - STRING interaction network
"rapK" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rapKannotation not available (335 aa)    
Predicted Functional Partners:
XCC4011
annotation not available (248 aa)
 
     
  0.962
XCC4013
Reductase/halogenase; Dehydrogenases (flavoproteins) (455 aa)
 
     
  0.950
XCC4005
Membrane protein; Predicted exporter (788 aa)
 
     
  0.944
XCC4008
Predicted acyltransferase (324 aa)
 
     
  0.938
acpP2
Acyl carrier protein (109 aa)
 
   
  0.938
XCC4009
Dehydratase; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases (95 aa)
 
     
  0.934
XCC4015
AMP-ligase; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases (511 aa)
 
   
  0.934
ubiA
4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate (301 aa)
   
 
    0.903
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (367 aa)
       
    0.901
XCC1021
Anthranilate/para-aminobenzoate synthases component I (451 aa)
       
    0.900
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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