STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4016Dipeptidyl-peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases (815 aa)    
Predicted Functional Partners:
XCC4015
AMP-ligase; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
     
 0.696
mopB
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family
  
 
 0.676
ampB
Aminopeptidase N
 
    0.652
XCC0024
Uncharacterized protein; Predicted aminopeptidases
 
  
 0.607
rapK
annotation not available
     
 0.592
XCC4005
Membrane protein; Predicted exporter
      
 0.583
XCC4008
Predicted acyltransferase
      
 0.583
XCC3646
annotation not available
  
     0.578
XCC4059
annotation not available
  
 
 
 0.573
XCC3921
Peptidase; Predicted aminopeptidases
 
  
 0.552
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (6%) [HD]