STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fldYTranscriptional regulator (435 aa)    
Predicted Functional Partners:
fldZ
Acyl transferase; Demethylmenaquinone methyltransferase
 
     0.936
fldA
Uncharacterized protein conserved in bacteria
 
     0.911
fldW
4-oxalomesaconate hydratase; Predicted metal-dependent hydrolase of the TIM-barrel fold
 
   
 0.873
cls5
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
       0.845
ligB
annotation not available
 
     0.799
ligA
annotation not available
 
     0.762
XCC0801
annotation not available
  
   
 0.623
XCC4027
Uncharacterized protein conserved in bacteria
       0.479
metF2
510-methylenetetrahydrofolate reductase
 
  
 0.465
pobR
PobR regulator; AraC-type DNA-binding domain-containing proteins
 
  
 0.425
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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