STRINGSTRING
CAP53595.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP53595.1" - Transposase and inactivated derivatives in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP53595.1Transposase and inactivated derivatives (284 aa)    
Predicted Functional Partners:
CAP53594.1
Transposase and inactivated derivatives (97 aa)
 
        0.799
fldW
4-oxalomesaconate hydratase; Predicted metal-dependent hydrolase of the TIM-barrel fold (340 aa)
              0.506
fldZ
Acyl transferase; Demethylmenaquinone methyltransferase (223 aa)
   
        0.497
fldA
Uncharacterized protein conserved in bacteria (351 aa)
              0.487
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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