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fldW protein (Xanthomonas campestris campestris) - STRING interaction network
"fldW" - 4-oxalomesaconate hydratase in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fldW4-oxalomesaconate hydratase; Predicted metal-dependent hydrolase of the TIM-barrel fold (340 aa)    
Predicted Functional Partners:
fldZ
Acyl transferase; Demethylmenaquinone methyltransferase (223 aa)
 
   
  0.989
fldA
Uncharacterized protein conserved in bacteria (351 aa)
 
   
    0.985
fldY
Transcriptional regulator (435 aa)
 
          0.873
ligB
annotation not available (299 aa)
 
          0.856
ligA
annotation not available (119 aa)
 
          0.781
XCC0363
Vanillate O-demethylase oxygenase subunit; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit (358 aa)
 
          0.567
XCC0801
annotation not available (143 aa)
 
          0.506
CAP53595.1
Transposase and inactivated derivatives (284 aa)
              0.506
CAP53594.1
Transposase and inactivated derivatives (97 aa)
              0.480
pobA
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (394 aa)
 
   
  0.470
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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