STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcCCation efflux system protein; Outer membrane protein (421 aa)    
Predicted Functional Partners:
XCC4037
Cation efflux system protein; Membrane-fusion protein
 
 
 0.995
czcA
Putative cation efflux system, RND-component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
 
  
 0.938
XCC2143
Cation efflux system protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
 
 
 0.827
XCC4039
annotation not available
       0.693
czcD
Cobalt-zinc-cadmium resistance protein; Co/Zn/Cd efflux system component
     
 0.651
XCC3914
Uncharacterized protein; ABC-type antimicrobial peptide transport system, permease component
 
 
 0.590
XCC3427
Outer membrane receptor proteins mostly Fe transport
  
   
 0.582
XCC0037
Pirin-related protein; Belongs to the pirin family
      
 0.581
XCC2717
Pirin; Unnamed protein product; Belongs to the pirin family
      
 0.581
XCC0565
ABC transporter permease; ABC-type antimicrobial peptide transport system, permease component
 
 
 0.579
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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